Extract regions from a sequence

Description

Extract regions from a sequence.

This tool uses EMBOSS command extractseq to read a sequence and write sub-sequences from it to file. The set of regions to extract is specified as pairs of start and end positions. The regions are written in the order in which they are specified. Thus, if the sequence AAAGGGTTT has been input and the regions: 7-9, 3-4 have been specified, then the output sequence will be: TTTAG. Optionally, each region may be written out as a separate sequence.

The input sequences can be in any of the EMBOSS compatible sequence formats.

For more details, please check the manual page of extractseq command.

Output

Output is a PNG, SVG or PDF formatted image file.