Pathways / KEGG enrichment for miRNA targets

Description

Performs a statistical test for enrichment of KEGG pathways in the predicted gene targets of a list of miRNAs.

Parameters

Details

This tool takes normalized data with miRNA IDs, fetches the target genes from miRBase, and runs a hypergeometric test for over-representation for KEGG pathways in this list. Analysis can be restricted to KEGG pathways which have a minimum, user-specified number of genes mapped to them (by default ten). The user needs to specify species for the miRNA data.

Output

Output is a text file with a list of significant categories.