Dataset and Motifs High-scoring Sequences Motif Diagrams Annotated Sequences Debugging Information


MAST - Motif Alignment and Search Tool

MAST version 4.0.0 (Release date: 2008-06-27 09:26:47 +1000 (Fri, 27 Jun 2008))

For further information on how to interpret these results or to get a copy of the MAST software please access http://meme.nbcr.net.


REFERENCE

If you use this program in your research, please cite:

Timothy L. Bailey and Michael Gribskov, "Combining evidence using p-values: application to sequence homology searches", Bioinformatics, 14(48-54), 1998.


DATABASE AND MOTIFS

	DATABASE ../../../tests/adh.s (peptide)
	Last updated on Thu Jul 17 14:11:37 2008
	Database contains 33 sequences, 9996 residues

	MOTIFS ../../../tests/meme/meme.adh.zoops (peptide)
	MOTIF WIDTH BEST POSSIBLE MATCH
	----- ----- -------------------
	  1    21   GKVVLITGCSSGIGKATAKHL
	  2    29   SVYCASKFAVRMLTRSMAMEYAPHGIRVN

	PAIRWISE MOTIF CORRELATIONS:
	MOTIF     1
	----- -----
	   2   0.30
	No overly similar pairs (correlation > 0.60) found.

	Random model letter frequencies (from non-redundant database):
	A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058 
	L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064 
	W 0.013 Y 0.033 

SECTION I: HIGH-SCORING SEQUENCES

LinksSequence NameDescriptionE-valueLength
D A ?
BUDC_KLETE ACETOIN(DIACETYL) REDUCTA... 1.3e-32 241
D A ?
YRTP_BACSU HYPOTHETICAL 25.3 KD PROT... 1.4e-32 238
D A ?
FIXR_BRAJA FIXR PROTEIN 3.5e-28 278
D A ?
AP27_MOUSE ADIPOCYTE P27 PROTEIN (AP... 1.1e-26 244
D A ?
HDHA_ECOLI 7-ALPHA-HYDROXYSTEROID DE... 1.6e-26 255
D A ?
DHGB_BACME GLUCOSE 1-DEHYDROGENASE B... 4.8e-26 262
D A ?
HDE_CANTR HYDRATASE-DEHYDROGENASE-E... 2.3e-25 906
D A ?
DHII_HUMAN CORTICOSTEROID 11-BETA-DE... 2.3e-25 292
D A ?
NODG_RHIME NODULATION PROTEIN G (HOS... 2.7e-25 245
D A ?
YINL_LISMO HYPOTHETICAL 26.8 KD PROT... 2.9e-25 248
D A ?
DHB2_HUMAN no comment 3.1e-25 387
D A ?
RIDH_KLEAE RIBITOL 2-DEHYDROGENASE (... 8.7e-25 249
D A ?
DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYD... 1.3e-24 270
D A ?
FVT1_HUMAN no comment 2.1e-24 332
D A ?
ENTA_ECOLI 2,3-DIHYDRO-2,3-DIHYDROXY... 6.7e-24 248
D A ?
2BHD_STREX 20-BETA-HYDROXYSTEROID DE... 1.5e-23 255
D A ?
BDH_HUMAN D-BETA-HYDROXYBUTYRATE DE... 2.4e-23 343
D A ?
HMTR_LEIMA no comment 4.4e-23 287
D A ?
DHES_HUMAN ESTRADIOL 17 BETA-DEHYDRO... 2e-22 327
D A ?
3BHD_COMTE 3-BETA-HYDROXYSTEROID DEH... 5.3e-22 253
D A ?
BA72_EUBSP 7-ALPHA-HYDROXYSTEROID DE... 5.5e-22 249
D A ?
GUTD_ECOLI SORBITOL-6-PHOSPHATE 2-DE... 3e-21 259
D A ?
DHB3_HUMAN no comment 3.9e-21 310
D A ?
BPHB_PSEPS BIPHENYL-CIS-DIOL DEHYDRO... 5.4e-19 275
D A ?
LIGD_PSEPA C ALPHA-DEHYDROGENASE (EC... 6.7e-19 305
D A ?
RFBB_NEIGO no comment 6.9e-19 346
D A ?
DHCA_HUMAN no comment 1.5e-17 276
D A ?
ADH_DROME ALCOHOL DEHYDROGENASE (EC... 1.5e-14 255
D A ?
FABI_ECOLI no comment 5.3e-14 262
D A ?
YURA_MYXXA no comment 7.1e-13 258
D A ?
PCR_PEA no comment 8.2e-11 399
D A ?
MAS1_AGRRA no comment 2.7e-09 476
D A ?
CSGA_MYXXA no comment 4.5e-08 166

SECTION II: MOTIF DIAGRAMS


LinksNameExpect   Motifs
S A ?
BUDC_KLETE 1.3e-32

1
2
S A ?
YRTP_BACSU 1.4e-32

1
2
S A ?
FIXR_BRAJA 3.5e-28

1
2
S A ?
AP27_MOUSE 1.1e-26

1
2
S A ?
HDHA_ECOLI 1.6e-26

1
2
S A ?
DHGB_BACME 4.8e-26

1
2
S A ?
HDE_CANTR 2.3e-25

1
2
1
2
S A ?
DHII_HUMAN 2.3e-25

1
2
S A ?
NODG_RHIME 2.7e-25

1
2
S A ?
YINL_LISMO 2.9e-25

1
2
S A ?
DHB2_HUMAN 3.1e-25

1
2
S A ?
RIDH_KLEAE 8.7e-25

1
2
S A ?
DHMA_FLAS1 1.3e-24

1
2
S A ?
FVT1_HUMAN 2.1e-24

1
2
S A ?
ENTA_ECOLI 6.7e-24

1
2
S A ?
2BHD_STREX 1.5e-23

1
1
2
S A ?
BDH_HUMAN 2.4e-23

1
2
S A ?
HMTR_LEIMA 4.4e-23

1
2
S A ?
DHES_HUMAN 2e-22

1
2
S A ?
3BHD_COMTE 5.3e-22

1
2
S A ?
BA72_EUBSP 5.5e-22

1
2
S A ?
GUTD_ECOLI 3e-21

1
2
S A ?
DHB3_HUMAN 3.9e-21

1
2
S A ?
BPHB_PSEPS 5.4e-19

1
2
S A ?
LIGD_PSEPA 6.7e-19

1
2
S A ?
RFBB_NEIGO 6.9e-19

1
2
S A ?
DHCA_HUMAN 1.5e-17

1
2
S A ?
ADH_DROME 1.5e-14

1
2
S A ?
FABI_ECOLI 5.3e-14

1
2
S A ?
YURA_MYXXA 7.1e-13

2
S A ?
PCR_PEA 8.2e-11

1
S A ?
MAS1_AGRRA 2.7e-09

1
2
S A ?
CSGA_MYXXA 4.5e-08

2
SCALE
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
1 25 50 75 100 125 150 175 200 225 250 275 300 325 350 375 400 425 450 475 500 525 550 575 600 625 650 675 700 725 750 775 800 825 850 875

SECTION III: ANNOTATED SEQUENCES


BUDC_KLETE
S D ?

ACETOIN(DIACETYL) REDUCTASE (EC 1.1.1.5) (ACETOIN DEHYDROGENASE)
LENGTH = 241 COMBINED P-VALUE = 3.95e-34 E-VALUE = 1.3e-32
DIAGRAM: 1-[1]-127-[2]-63
      [1]
      8.9e-19
      GKVVLITGCSSGIGKATAKHL
      +++++++++++++++++++++
1    MQKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATATAVAAEINQAGGRAVAIKVDVSRRDQVFAAVEQARK

                                                                               [
                                                                               1
                                                                               S
                                                                               +
76   ALGGFNVIVNNAGIAPSTPIESITEEIVDRVYNINVKGVIWGMQAAVEAFKKEGHGGKIVNACSQAGHVGNPELA

     2]
     .1e-22
     VYCASKFAVRMLTRSMAMEYAPHGIRVN
     ++++++++++++++++++++++ +++++
151  VYSSSKFAVRGLTQTAARDLAPLGITVNGFCPGIVKTPMWAEIDRQCRKRRANRWATARLNLPNASPLAACRSLK



YRTP_BACSU
S D ?

HYPOTHETICAL 25.3 KD PROTEIN IN RTP 5'REGION (ORF238)
LENGTH = 238 COMBINED P-VALUE = 4.17e-34 E-VALUE = 1.4e-32
DIAGRAM: 5-[1]-126-[2]-57
          [1]
          2.8e-17
          GKVVLITGCSSGIGKATAKHL
          +++++++++++++++++++++
1    MQSLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEVKALGVKAAFAAADVKDADQVNQAVA

       [2]
       4.0e-24
       SVYCASKFAVRMLTRSMAMEYAPHGIRVN
       ++++++++++ ++++++++++++++++++
151  VTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELNLTDGNPEKVMQPEDLAEYMVAQLKLDPR



FIXR_BRAJA
S D ?

FIXR PROTEIN
LENGTH = 278 COMBINED P-VALUE = 1.05e-29 E-VALUE = 3.5e-28
DIAGRAM: 35-[1]-130-[2]-63
                                        [1]
                                        8.4e-16
                                        GKVVLITGCSSGIGKATAKHL
                                         ++++ +++++++++++++ +
1    MGLDLPNDNLIRGPLPEAHLDRLVDAVNARVDRGEPKVMLLTGASRGIGHATAKLFSEAGWRIISCARQPFDGER

                                         [2]
                                         2.7e-21
                                         SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                                         +++  +++++ ++++++++++++++++++
151  APILLAQGLFDELRAASGSIVNVTSIAGSRVHPFAGSAYATSKAALASLTRELAHDYAPHGIRVNAIAPGEIRTD



AP27_MOUSE
S D ?

ADIPOCYTE P27 PROTEIN (AP27)
LENGTH = 244 COMBINED P-VALUE = 3.19e-28 E-VALUE = 1.1e-26
DIAGRAM: 6-[1]-119-[2]-69
           [1]
           9.5e-15
           GKVVLITGCSSGIGKATAKHL
           + +++++++++++++ +++++
1    MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIG

                                                                            [2]
                                                                            1.0e
                                                                            SVYC
                                                                              ++
76   PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS

     
     -20
     ASKFAVRMLTRSMAMEYAPHGIRVN
     ++++++++++++++++++++ ++++
151  STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSD



HDHA_ECOLI
S D ?

7-ALPHA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.159) (HSDH)
LENGTH = 255 COMBINED P-VALUE = 4.97e-28 E-VALUE = 1.6e-26
DIAGRAM: 10-[1]-125-[2]-70
               [1]
               1.9e-16
               GKVVLITGCSSGIGKATAKHL
               ++++++++++ ++++++++++
1    MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQEL

           [2]
           7.3e-19
           SVYCASKFAVRMLTRSMAMEYAPHGIRVN
           +++ +++++ +++++ +++++++++++++
151  NKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIA



DHGB_BACME
S D ?

GLUCOSE 1-DEHYDROGENASE B (EC 1.1.1.47)
LENGTH = 262 COMBINED P-VALUE = 1.44e-27 E-VALUE = 4.8e-26
DIAGRAM: 6-[1]-130-[2]-76
           [1]
           3.4e-15
           GKVVLITGCSSGIGKATAKHL
           ++++++++++ ++++++++++
1    MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVIN

            [2]
            1.1e-19
            SVYCASKFAVRMLTRSMAMEYAPHGIRVN
             ++ +++++++ +++++++++++++++++
151  KIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEE



HDE_CANTR
S D ?

HYDRATASE-DEHYDROGENASE-EPIMERASE (HDE)
LENGTH = 906 COMBINED P-VALUE = 7.01e-27 E-VALUE = 2.3e-25
DIAGRAM: 7-[1]-132-[2]-132-[1]-122-[2]-413
            [1]
            1.9e-13
            GKVVLITGCSSGIGKATAKHL
            +++++++++++++++ +++++
1    MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNV

               [2]
               9.7e-14
               SVYCASKFAVRMLTRSMAMEYAPHGIRVN
               +++ +++ ++ ++ ++++++ ++++++ +
151  PAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPLARSRMTESILPPPMLEKLGPEKVAPLVLYLS

                          [1]
                          3.2e-17
                          GKVVLITGCSSGIGKATAKHL
                          ++++++++++ ++++++++++
301  TNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQ

                   [2]
                   4.3e-18
                   SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                   ++++++++++ +++++++ + ++ +++++
451  NITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHAETAMTLTIFREQDKNLYHADQVAPLL



DHII_HUMAN
S D ?

CORTICOSTEROID 11-BETA-DEHYDROGENASE (EC 1.1.1.146) (11-DH) (11-BETA- HYDROXYSTEROID DEHYDROGENASE) (11-BETA-HSD)
LENGTH = 292 COMBINED P-VALUE = 7.06e-27 E-VALUE = 2.3e-25
DIAGRAM: 33-[1]-126-[2]-83
                                      [1]
                                      1.1e-17
                                      GKVVLITGCSSGIGKATAKHL
                                      +++++++++++++++++++++
1    MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV

                                   [2]
                                   1.4e-16
                                   SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                                   +++++++++++++ ++ +++++ ++++++
151  TVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK



NODG_RHIME
S D ?

NODULATION PROTEIN G (HOST-SPECIFICITY OF NODULATION PROTEIN C)
LENGTH = 245 COMBINED P-VALUE = 8.16e-27 E-VALUE = 2.7e-25
DIAGRAM: 5-[1]-123-[2]-67
          [1]
          7.3e-13
          GKVVLITGCSSGIGKATAKHL
          + +++++++++ ++ ++++ +
1    MFELTGRKALVTGASGAIGGAIARVLHAQGAIVGLHGTQIEKLETLATELGDRVKLFPANLANRDEVKALGQRAE

                                                                               [
                                                                               3
                                                                               S
                                                                               +
76   ADLEGVDILVNNAGITKDGLFLHMADPDWDIVLEVNLTAMFRLTREITQQMIRRRNGRIINVTSVAGAIGNPGQT

     2]
     .5e-21
     VYCASKFAVRMLTRSMAMEYAPHGIRVN
     ++++++++++++++++++++++ +++++
151  NYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNHKQKEKIMVAIPIHRMGTGTEVASAVAYLAS



YINL_LISMO
S D ?

HYPOTHETICAL 26.8 KD PROTEIN IN INLA 5'REGION (ORFA)
LENGTH = 248 COMBINED P-VALUE = 8.79e-27 E-VALUE = 2.9e-25
DIAGRAM: 4-[1]-126-[2]-68
         [1]
         2.4e-18
         GKVVLITGCSSGIGKATAKHL
         +++++++++++++++++++ +
1    MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQIIKANSGEAIFAKTDVTKREDNKKLVEL

      [2]
      1.1e-15
      SVYCASKFAVRMLTRSMAMEYAPHGIRVN
      +++++++++++ +++ ++++ ++++ +++
151  GAVYGATKWAVRDLMEVLRMESAQEGTNIRTATIYPAAINTELLETITDKETEQGMTSLYKQYGITPDRIASIVA



DHB2_HUMAN
S D ?

no comment
LENGTH = 387 COMBINED P-VALUE = 9.29e-27 E-VALUE = 3.1e-25
DIAGRAM: 81-[1]-127-[2]-129

           [1]
           5.4e-16
           GKVVLITGCSSGIGKATAKHL
           +++++++++++++++++++++
76   ELLPVDQKAVLVTGGDCGLGHALCKYLDELGFTVFAGVLNENGPGAEELRRTCSPRLSVLQMDITKPVQIKDAYS

         [2]
         2.0e-18
         SVYCASKFAVRMLTRSMAMEYAPHGIRVN
         +++++++++++++++ ++++++++++++
226  MERLASYGSSKAAVTMFSSVMRLELSKWGIKVASIQPGGFLTNIAGTSDKWEKLEKDILDHLPAEVQEDYGQDYI



RIDH_KLEAE
S D ?

RIBITOL 2-DEHYDROGENASE (EC 1.1.1.56) (RDH)
LENGTH = 249 COMBINED P-VALUE = 2.65e-26 E-VALUE = 8.7e-25
DIAGRAM: 13-[1]-123-[2]-63
                  [1]
                  4.3e-16
                  GKVVLITGCSSGIGKATAKHL
                  ++++ ++++++++++++++++
1    MKHSVSSMNTSLSGKVAAITGAASGIGLECARTLLGAGAKVVLIDREGEKLNKLVAELGENAFALQVDLMQADQV

            [2]
            1.9e-17
            SVYCASKFAVRMLTRSMAMEYAPHGIRVN
            ++++++++++++++++ +++++++++++
151  VVPVIWEPVYTASKFAVQAFVHTTRRQVAQYGVRVGAVLPGPVVTALLDDWPKAKMDEALANGSLMQPIEVAESV



DHMA_FLAS1
S D ?

N-ACYLMANNOSAMINE 1-DEHYDROGENASE (EC 1.1.1.233) (NAM-DH)
LENGTH = 270 COMBINED P-VALUE = 4.04e-26 E-VALUE = 1.3e-24
DIAGRAM: 13-[1]-128-[2]-79
                  [1]
                  4.7e-15
                  GKVVLITGCSSGIGKATAKHL
                  ++++++++++++++++++++
1    TTAGVSRRPGRLAGKAAIVTGAAGGIGRATVEAYLREGASVVAMDLAPRLAATRYEEPGAIPIACDLADRAAIDA

                 [2]
                 2.2e-18
                 SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                 +++ ++++++ +++++++++++++++ ++
151  GSVNSFMAEPEAAAYVAAKGGVAMLTRAMAVDLARHGILVNMIAPGPVDVTGNNTGYSEPRLAEQVLDEVALGRP



FVT1_HUMAN
S D ?

no comment
LENGTH = 332 COMBINED P-VALUE = 6.24e-26 E-VALUE = 2.1e-24
DIAGRAM: 31-[1]-131-[2]-120
                                    [1]
                                    5.2e-15
                                    GKVVLITGCSSGIGKATAKHL
                                    + +++++++++++++++++++
1    MLLLAAAFLVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKE

                                      [2]
                                      2.0e-18
                                      SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                                      +++++++++++++ +++++++++++++++
151  YPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTPGFA



ENTA_ECOLI
S D ?

2,3-DIHYDRO-2,3-DIHYDROXYBENZOATE DEHYDROGENASE (EC 1.3.1.28)
LENGTH = 248 COMBINED P-VALUE = 2.02e-25 E-VALUE = 6.7e-24
DIAGRAM: 4-[1]-116-[2]-78
         [1]
         3.6e-17
         GKVVLITGCSSGIGKATAKHL
         +++++++++++++++++++++
1    MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDA

                                                                       [2]
                                                                       1.8e-15
                                                                       SVYCASKFA
                                                                       +++++++++
76   LVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAA

     
     
     VRMLTRSMAMEYAPHGIRVN
     ++++  +  ++++ ++++++
151  LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFL


2BHD_STREX
  20-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.53)
  LENGTH = 255  COMBINED P-VALUE = 4.68e-25  E-VALUE =  1.5e-23
  DIAGRAM: 5_[1]_3_[1]_99_[2]_77

          [1]                     [1]
          4.4e-13                 4.5e-05
          GKVVLITGCSSGIGKATAKHL   GKVVLITGCSSGIGKATAKHL
          ++++++++++++++ + +++    + +++        + ++++++
1    MNDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR

                                                                               [
                                                                               3
                                                                               S
                                                                               +
76   EEFGSVDGLVNNAGISTGMFLETESVERFRKVVDINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTS

     2]
     .2e-19
     VYCASKFAVRMLTRSMAMEYAPHGIRVN
     ++++++++++++++ +++++++ +++++
151  SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL



BDH_HUMAN
S D ?

D-BETA-HYDROXYBUTYRATE DEHYDROGENASE PRECURSOR (EC 1.1.1.30) (BDH) (3-HYDROXYBUTYRATE DEHYDROGENASE) (FRAGMENT)
LENGTH = 343 COMBINED P-VALUE = 7.26e-25 E-VALUE = 2.4e-23
DIAGRAM: 54-[1]-130-[2]-109
                                                           [1]
                                                           1.8e-15
                                                           GKVVLITGCSSGIGKATAKHL
                                                           ++++++++++++ ++++++++
1    GLRPPPPGRFSRLPGKTLSACDRENGARRPLLLGSTSFIPIGRRTYASAAEPVGSKAVLVTGCDSGFGFSLAKHL

                                                            [2]
                                                            6.5e-17
                                                            SVYCASKFAVRMLTRSMAME
                                                            ++++ +++++++++ +++++
151  GEVEFTSLETYKQVAEVNLWGTVRMTKSFLPLIRRAKGRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYE

     
     
     YAPHGIRVN
     +++ +++++
226  MYPLGVKVSVVEPGNFIAATSLYNPESIQAIAKKMWEELPEVVRKDYGKKYFDEKIAKMETYCSSGSTDTSPVID



HMTR_LEIMA
S D ?

no comment
LENGTH = 287 COMBINED P-VALUE = 1.33e-24 E-VALUE = 4.4e-23
DIAGRAM: 5-[1]-164-[2]-68
          [1]
          1.4e-12
          GKVVLITGCSSGIGKATAKHL
           ++++++++++ +++++++ +
1    MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS

                                             [2]
                                             2.3e-19
                                             SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                                             + +++++++++++++++++++++ +++++
151  PYFLIKAFAHRSRHPSQASRTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL



DHES_HUMAN
S D ?

ESTRADIOL 17 BETA-DEHYDROGENASE (EC 1.1.1.62) (20 ALPHA-HYDROXYSTEROID DEHYDROGENASE) (E2DH) (17-BETA-HSD) (PLACENTAL 17-BETA-HYDROXYSTEROID DEHYDROGENASE)
LENGTH = 327 COMBINED P-VALUE = 5.97e-24 E-VALUE = 2e-22
DIAGRAM: 1-[1]-130-[2]-146
      [1]
      1.3e-14
      GKVVLITGCSSGIGKATAKHL
        ++++++++++++++++ ++
1    ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA

       [2]
       8.7e-17
       SVYCASKFAVRMLTRSMAMEYAPHGIRVN
        ++++++++++++++++++ + + +++ +
151  FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV


3BHD_COMTE
  3-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.51)
  LENGTH = 253  COMBINED P-VALUE = 1.62e-23  E-VALUE =  5.3e-22
  DIAGRAM: 5_[1]_122_[2]_76

          [1]
          2.5e-15
          GKVVLITGCSSGIGKATAKHL
          ++++++++++++++++ ++ +
1    TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQ

                                                                              [2
                                                                              2.
                                                                              SV
                                                                              +
76   RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAG

     ]
     1e-15
     YCASKFAVRMLTRSMAMEYAPHGIRVN
     +++++++++++++++++ +++++  ++
151  YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQL



BA72_EUBSP
S D ?

7-ALPHA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.159) (BILE ACID 7-DEHYDROXYLASE) (BILE ACID-INDUCIBLE PROTEIN)
LENGTH = 249 COMBINED P-VALUE = 1.65e-23 E-VALUE = 5.5e-22
DIAGRAM: 5-[1]-128-[2]-66
          [1]
          1.0e-14
          GKVVLITGCSSGIGKATAKHL
          +++ +++++ ++++++ ++ +
1    MNLVQDKVTIITGGTRGIGFAAAKIFIDNGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAA

         [2]
         5.4e-16
         SVYCASKFAVRMLTRSMAMEYAPHGIRVN
           + +++++++++++ + +++ ++++++
151  SLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMTNGNPPEIMEGYLKALPMKRMLEPEEIANVY



GUTD_ECOLI
S D ?

SORBITOL-6-PHOSPHATE 2-DEHYDROGENASE (EC 1.1.1.140) (GLUCITOL-6- PHOSPHATE DEHYDROGENASE) (KETOSEPHOSPHATE REDUCTASE)
LENGTH = 259 COMBINED P-VALUE = 8.98e-23 E-VALUE = 3e-21
DIAGRAM: 1-[1]-129-[2]-79
      [1]
      3.4e-10
      GKVVLITGCSSGIGKATAKHL
      ++++++ ++++ ++  +++ +
1    MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSCLALSRGV

      [2]
      8.7e-20
      SVYCASKFAVRMLTRSMAMEYAPHGIRVN
      + +++++++ +++++++++++++++++++
151  NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGC



DHB3_HUMAN
S D ?

no comment
LENGTH = 310 COMBINED P-VALUE = 1.18e-22 E-VALUE = 3.9e-21
DIAGRAM: 47-[1]-127-[2]-86
                                                    [1]
                                                    7.8e-15
                                                    GKVVLITGCSSGIGKATAKHL
                                                    ++++++++++ +++++++ ++
1    MGDVLEQFFILTGLLVCLACLAKCVRFSRCVLLNYYKVLPKSFLRSMGQWAVITGAGDGIGKAYSFELAKRGLNV

                                                  [2]
                                                  3.4e-15
                                                  SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                                                  ++++++++++++++++++ +++ + + ++
151  QSLIHCNITSVVKMTQLILKHMESRQKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVIIQV



BPHB_PSEPS
S D ?

BIPHENYL-CIS-DIOL DEHYDROGENASE (EC 1.3.1.-)
LENGTH = 275 COMBINED P-VALUE = 1.63e-20 E-VALUE = 5.4e-19
DIAGRAM: 4-[1]-125-[2]-96
         [1]
         2.1e-14
         GKVVLITGCSSGIGKATAKHL
         + ++++++++++++++++ ++
1    MKLKGEAVLITGGASGLGRALVDRFVAEAKVAVLDKSAERLAELETDLGDNVLGIVGDVRSLEDQKQAASRCVAR

     [2]
     2.5e-13
     SVYCASKFAVRMLTRSMAMEYAPHGIRVN
     + ++++++++++++++++++++++  +
151  PLYTAAKQAIVGLVRELAFELAPYVRVNGVGPGGMNSDMRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEE



LIGD_PSEPA
S D ?

C ALPHA-DEHYDROGENASE (EC -.-.-.-)
LENGTH = 305 COMBINED P-VALUE = 2.04e-20 E-VALUE = 6.7e-19
DIAGRAM: 5-[1]-128-[2]-122
          [1]
          1.4e-12
          GKVVLITGCSSGIGKATAKHL
          ++++ +++++++ ++ +++ +
1    MKDFQDQVAFITGGASGAGFGQAKVFGQAGAKIVVADVRAEAVEKAVAELEGLGITAHGIVLDIMDREAYARAAD

         [2]
         3.7e-15
         SVYCASKFAVRMLTRSMAMEYAPHGIRVN
          ++++++++ +++++ +++ + ++++ ++
151  SALAGPYSAAKAASINLMEGYRQGLEKYGIGVSVCTPANIKSNIAEASRLRPAKYGTSGYVENEESIASLHSIHQ



RFBB_NEIGO
S D ?

no comment
LENGTH = 346 COMBINED P-VALUE = 2.09e-20 E-VALUE = 6.9e-19
DIAGRAM: 5-[1]-136-[2]-155
          [1]
          1.2e-12
          GKVVLITGCSSGIGKATAKHL
          +++++++++++ ++ + +++
1    MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVF

                 [2]
                 3.4e-15
                 SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                 +++++++++ +++++++++ ++   ++ +
151  DLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYGDG



DHCA_HUMAN
S D ?

no comment
LENGTH = 276 COMBINED P-VALUE = 4.62e-19 E-VALUE = 1.5e-17
DIAGRAM: 3-[1]-166-[2]-57
        [1]
        3.4e-15
        GKVVLITGCSSGIGKATAKHL
         ++++++++++++++++++++
1    SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF

                                             [2]
                                             4.5e-11
                                             SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                                             ++++ ++ +++ +++ +++ +++++
151  PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC



ADH_DROME
S D ?

ALCOHOL DEHYDROGENASE (EC 1.1.1.1)
LENGTH = 255 COMBINED P-VALUE = 4.42e-16 E-VALUE = 1.5e-14
DIAGRAM: 5-[1]-123-[2]-77
          [1]
          1.8e-10
          GKVVLITGCSSGIGKATAKHL
          +++++   + +++++ +++++
1    SFTLTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINPKVTVTFYPYDVTVPIAETTKL

                                                                               [
                                                                               1
                                                                               S
                                                                               +
76   LKTIFAQLKTVDVLINGAGILDDHQIERTIAVNYTGLVNTTTAILDFWDKRKGGPGGIICNIGSVTGFNAIYQVP

     2]
     .1e-12
     VYCASKFAVRMLTRSMAMEYAPHGIRVN
     +++ ++++++++++++++    ++++ +
151  VYSGTKAAVVNFTSSLAKLAPITGVTAYTVNPGITRTTLVHKFNSWLDVEPQVAEKLLAHPTQPSLACAENFVKA



FABI_ECOLI
S D ?

no comment
LENGTH = 262 COMBINED P-VALUE = 1.59e-15 E-VALUE = 5.3e-14
DIAGRAM: 5-[1]-130-[2]-77
          [1]
          6.4e-10
          GKVVLITGCSSGIGKATAKHL
          ++++++++ ++ +  ++ ++
1    MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMF

           [2]
           1.1e-12
           SVYCASKFAVRMLTRSMAMEYAPHGIRVN
            +++ +++++++ +++++  +++++++++
151  RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDV



YURA_MYXXA
S D ?

no comment
LENGTH = 258 COMBINED P-VALUE = 2.17e-14 E-VALUE = 7.1e-13
DIAGRAM: 157-[2]-72

            [2]
            8.3e-18
            SVYCASKFAVRMLTRSMAMEYAPHGIRVN
            + +++++++++ ++++++++++ ++++++
151  GFRGLPATRYSASKAFLSTFMESLRVDLRGTGVRVTCIYPGFVKSELTATNNFPMPFLMETHDAVELMGKGIVRG



PCR_PEA
S D ?

no comment
LENGTH = 399 COMBINED P-VALUE = 2.49e-12 E-VALUE = 8.2e-11
DIAGRAM: 85-[1]-293

               [1]
               2.8e-15
               GKVVLITGCSSGIGKATAKHL
               + +++++++++++++++++++
76   SSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKSAGLAKENYTIMHLDLASLDS



MAS1_AGRRA
S D ?

no comment
LENGTH = 476 COMBINED P-VALUE = 8.12e-11 E-VALUE = 2.7e-09
DIAGRAM: 244-[1]-124-[2]-58

                        [1]
                        6.2e-13
                        GKVVLITGCSSGIGKATAKHL
                        ++++++ ++++++++++++++
226  GRVLHFRRGFSHWTVEIHQSPVILVSGSNRGVGKAIAEDLIAHGYRLSLGARKVKDLEVAFGPQDEWLHYARFDA

                   [2]
                   2.3e-05
                   SVYCASKFAVRMLTRSMAMEYAPHGIRVN
                     + +++ ++ +++++ ++     +
376  NINSMSGQRVLNPLVGYNMTKHALGGLTKTTQHVGWDRRCAAIDICLGFVATDMSAWTDLIASKDMIQPEDIAKL



CSGA_MYXXA
S D ?

no comment
LENGTH = 166 COMBINED P-VALUE = 1.37e-09 E-VALUE = 4.5e-08
DIAGRAM: 85-[2]-52

               [2]
               5.8e-13
               SVYCASKFAVRMLTRSMAMEYAPHGIRVN
               +++ ++++++ + ++++  ++++++ +
76   SLAANTDGGAYAYRMSKAALNMAVRSMSTDLRPEGFVTVLLHPGWVQTDMGGPDATLPAPDSVRGMLRVIDGLNP

Debugging Information




CPU: tlb-sayonara.imb.uq.edu.au
Time 0.026995 secs.

mast ../../../tests/meme/meme.adh.zoops ../../../tests/adh.s -stdout

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E
Links to Entrez database at NCBI
S
Links to sequence scores (section I)
D
Links to motif diagrams (section II)
A
Links to sequence/motif annotated alignments (section III)
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